Publications

All publications can be found also on Google Scholar.

2018

TC Lamnidis, K Majander, C Jeong, E Salmela, A Wessman, V Moiseyev, V Khartanovich, O Balanovsky, M Ongyerth, A Weihmann, A Sajantila, J Kelso, S Pääbo, P Onkamo, W Haak, J Krause, S SchiffelsAncient Fennoscandian genomes reveal origin and spread of Siberian ancestry in Europe. Nature Communications (2018) [Website] [PDF]

C Posth, N Nakatsuka, I Lazaridis, P Skoglund, S Mallick, TC Lamnidis, N Rohland, K Nägele, N Adamski, E Bertolini, N Broomandkhoshbacht, A Cooper, BJ Culleton, T Ferraz, M Ferry, A Furtwängler, W Haak, K Harkins, TK Harper, T Hünemeier, A Marie Lawson, B Llamas, M Michel, E Nelson, J Oppenheimer, N Patterson, S Schiffels, J Sedig, K Stewardson, S Talamo, CC Wang, JJ Hublin, M Hubbe, K Harvati, A Nuevo Delaunay, J Beier, M Francken, P Kaulicke, H Reyes-Centeno, K Rademaker, WR Trask, M Robinson, SM Gutierrez, KM Prufer, DC Salazar-García, EN Chim, L Müller Plumm Gomes, ML Alves, A Liryo, M Inglez, RE Oliveira, DV Bernardo, A Barioni, V Wesolowski, NA Scheifler, MA Rivera, CR Plens, PG Messineo, L Figuti, D Corach, C Scabuzzo, S Eggers, P DeBlasis, M Reindel, C Méndez, G Politis, E Tomasto-Cagigao, DJ Kennett, A Strauss, L Fehren-Schmitz, J Krause, D Reich. Reconstructing the Deep Population History of Central and South America Cell (2018) [Website]

W Haak, S Schiffels. Möglichkeiten und Grenzen molekulargenetischer Untersuchungen in den Geschichtswissenschaften. N.T.M. Zeitschrift für Geschichte der Wissenschaften, Technik und Medizin (2018) [Website] [PDF]

BA Potter, JF Baichtal, AB Beaudoin, L Fehren-Schmitz, C Vance Haynes, VT Holliday, CE Holmes, JW Ives, RL Kelly, B Llamas, RS Malhi, DS Miller, D Reich, J D. Reuther, S Schiffels, TA Surovell. Current evidence allows multiple models for the peopling of the Americas. Science Advances (2018) [Website] [PDF]

(Preprint) C Jeong, O Balanovsky, E Lukianova, N Kahbatkyzy, P Flegontov, V Zaporozhchenko, A Immel, CC Wang, O Ixan, E Khussainova, B Bekmanov, V Zaibert, M Lavryashina, E Pocheshkhova, Y Yusupov, A Agdzhoyan, K Sergey, A Bukin, P Nymadawa, M Churnosov, R Skhalyakho, D Daragan, Y Bogunov, A Bogunova, A Shtrunov, N Dubova, M Zhabagin, L Yepiskoposyan, V Churakov, N Pislegin, L Damba, L Saroyants, K Dibirova, L Artamentova, O Utevska, E Idrisov, E Kamenshchikova, I Evseeva, M Metspalu, M Robbeets, L Djansugurova, E Balanovska, S Schiffels, W Haak, D Reich, J Krause. Characterizing the genetic history of admixture across inner Eurasia. biorxiv (2018) [Website] [PDF]

(Preprint) CC Wang, S Reinhold, A Kalmykov, A Wissgott, G Brandt, C Jeong, O Cheronet, M Ferry, E Harney, D Keating, S Mallick, N Rohland, K Stewardson, AR Kantorovich, VE Maslov, VG Petrenko, VR Erlikh, BC Atabiev, RG Magomedov, PL Kohl, KW Alt, SL Pichler, C Gerling, H Meller, B Vardanyan, L Yeganyan, AD Rezepkin, D Mariaschk, NY Berezina, J Gresky, K Fuchs, C Knipper, S Schiffels, E Balanovska, O Balanovsky, I Mathieson, T Higham, YB Berezin, AP Buzhilova, V Trifonov, R Pinhasi, AB Belinskiy, D Reich, S Hansen, J Krause, W Haak. The genetic prehistory of the Greater Caucasus. biorxiv (2018) [Website] [PDF]

M van de Loosdrecht, A Bouzouggar, L Humphrey, C Posth, N Barton, A Aximu-Petri, B Nickel, S Nagel, EH Talbi, M Abdeljalil El Hajraoui, S Amzazi, JJ Hublin, S Pääbo, S Schiffels, M Meyer, W Haak, C Jeong, J Krause. Pleistocene North African genomes link Near Eastern and sub-Saharan African human populations. Science (2018) [Website]

(Letter) Ben A. Potter, Alwynne B. Beaudoin, CV Haynes, VT Holliday, CE Holmes, JW Ives, R Kelly, B Llamas, R Malhi, S Miller, D Reich, JD Reuther, S Schiffels, T Surovell. Arrival routes of first Americans uncertain. Science (2018) [Website]

A Mittnik, CC Wang, S Pfrengle, M Daubaras, G Zariņa, F Hallgren, R Allmäe, V Khartanovich, V Moiseyev, A Furtwängler, A Andrades Valtueña, M Feldman, C Economou, M Oinonen, A Vasks, M Tõrv, O Balanovsky, D Reich, R Jankauskas, W Haak, S Schiffels, J Krause: The genetic prehistory of the Baltic Sea region. Nature Communications (2018) [Website] [PDF]

2017

S Schiffels, D Sayer: Investigating Anglo-Saxon migration history with ancient and modern DNA. Tagungen Des Landesmuseums Für Vorgeschichte Halle (2017) [PDF]

(Preprint) S Schiffels, V Mustonen, M Lässig: The asexual genome of Drosophila. biorxiv (2017) [Website] [PDF]

(Preprint) P Flegontov, NE Altinisik, P Changmai, N Rohland, S Mallick, DA Bolnick, F Candilio, O Flegontova, C Jeong, TK Harper, D Keating, DJ Kennett, AM Kim, TC Lamnidis, I Olalde, J Raff, RA Sattler, P Skoglund, EJ Vajda, S Vasilyev, E Veselovskaya, MG Hayes, DH O’Rourke, R Pinhasi, J Krause, D Reich, S Schiffels: Paleo-Eskimo genetic legacy across North America. bioRxiv (2017) [Website] [PDF]

VJ Schuenemann, A Peltzer, B Welte, WP van Pelt, M Molak, CC Wang, A Furtwängler, C Urban, E Reiter, K Nieselt, B Teßmann, M Francken, K Harvati, W Haak, S Schiffels, J Krause: Ancient Egyptian mummy genomes suggest an increase of Sub-Saharan African ancestry in post-Roman periods. Nature communications (2017) [Website] [PDF]

2016 and before

AS Malaspinas, MC Westaway, CMuller, VC Sousa, O Lao, I Alves, A Bergström, G Athanasiadis, JY Cheng, JE Crawford, TH Heupink, E Macholdt, S Peischl, S Rasmussen, S Schiffels, S Subramanian, JL Wright, A Albrechtsen, C Barbieri, I Dupanloup, A Eriksson, A Margaryan, I Moltke, I Pugach, TS Korneliussen, IP Levkivskyi, JV Moreno-Mayar, S Ni, F Racimo, M Sikora, Y Xue, FA Aghakhanian, N Brucato, S Brunak, PF Campos, W Clark, S Ellingvåg, G Fourmile, P Gerbault, D Injie, G Koki, M Leavesley, B Logan, A Lynch, EA Matisoo-Smith, PJ McAllister, AJ Mentzer, M Metspalu, AB Migliano, L Murgha, ME Phipps, W Pomat, D Reynolds, FX Ricaut, P Siba, MG Thomas, T Wales, C Ma’run Wall, SJ Oppenheimer, C Tyler-Smith, R Durbin, J Dortch, A Manica, MH Schierup, RA Foley, M Mirazón Lahr, C Bowern, JD Wall, T Mailund, M Stoneking, R Nielsen, MS Sandhu, L Excoffier, DM Lambert, E Willerslev: A genomic history of Aboriginal Australia. Nature (2016) [Website]

Qi Fu, C Posth, M Hajdinjak, M Petr, S Mallick, D Fernandes, A Furtwängler, W Haak, M Meyer, A Mittnik, B Nickel, A Peltzer, N Rohland, V Slon, S Talamo, I Lazaridis, M Lipson, I Mathieson, S Schiffels, P Skoglund, AP Derevianko, N Drozdov, V Slavinsky, A Tsybankov, R Grifoni Cremonesi, F Mallegni, B Gély, E Vacca, MR González Morales, LG Straus, C Neugebauer-Maresch, M Teschler-Nicola, S Constantin, OT Moldovan, S Benazzi, M Peresani, D Coppola, M Lari, S Ricci, A Ronchitelli, F Valentin, C Thevenet, K Wehrberger, D Grigorescu, H Rougier, I Crevecoeur, D Flas, P Semal, MA Mannino, C Cupillard, H Bocherens, NJ Conard, K Harvati, V Moiseyev, DG Drucker, J Svoboda, MP Richards, D Caramelli, R Pinhasi, J Kelso, N Patterson, J Krause, S Pääbo, D Reich: The genetic history of Ice Age Europe. Nature (2016) [Website]

S Schiffels, W Haak, P Paajanen, B Llamas, E Popescu, L Loe, R Clarke, A Lyons, R Mortimer, D Sayer, C Tyler-Smith, A Cooper, R Durbin: Iron age and Anglo-Saxon genomes from East England reveal British migration history. Nature communications (2016) [Website] [PDF]

M Malinsky, RJ Challis, AM Tyers, S Schiffels, Y Terai, BP Ngatunga, EA Miska, R Durbin, MJ Genner, GF Turner: Genomic islands of speciation separate cichlid ecomorphs in an East African crater lake. Science (2015) [Website]

The UK10K Consortium: The UK10K project identifies rare variants in health and disease.
Nature (2015) [Website] [PDF]

M Raghavan, M Steinrücken, K Harris, S Schiffels, S Rasmussen, M DeGiorgio, A Albrechtsen, C Valdiosera, MC Ávila-Arcos, AS Malaspinas, A Eriksson, I Moltke, M Metspalu, JR Homburger, J Wall, OE Cornejo, JV Moreno-Mayar, TS Korneliussen, T Pierre, M Rasmussen, PF Campos, P de Barros Damgaard, ME Allentoft, J Lindo, E Metspalu, R Rodríguez-Varela, J Mansilla, C Henrickson, A Seguin-Orlando, H Malmström, T Stafford, SS Shringarpure, A Moreno-Estrada, M Karmin, K Tambets, A Bergström, Y Xue, V Warmuth, AD Friend, J Singarayer, P Valdes, F Balloux, I Leboreiro, JL Vera, H Rangel-Villalobos, D Pettener, D Luiselli, LG Davis, E Heyer, CPE Zollikofer, MS Ponce de León, CI Smith, V Grimes, KA Pike, M Deal, BT Fuller, B Arriaza, V Standen, MF Luz, F Ricaut, N Guidon, L Osipova, MI Voevoda, OL Posukh, O Balanovsky, M Lavryashina, Y Bogunov, E Khusnutdinova, M Gubina, E Balanovska, S Fedorova, S Litvinov, B Malyarchuk, M Derenko, MJ Mosher, D Archer, J Cybulski, B Petzelt, J Mitchell, R Worl, PJ Norman, P Parham, BM Kemp, T Kivisild, C Tyler-Smith, MS Sandhu, M Crawford, R Villems, DG Smith, MR Waters, T Goebel, JR Johnson, RS Malhi, M Jakobsson, DJ Meltzer, A Manica, R Durbin, CD Bustamante, YS Song, R Nielsen, E Willerslev: Genomic evidence for the Pleistocene and recent population history of Native Americans. Science (2015) [Website]

L Pagani, S Schiffels, D Gurdasani, P Danecek, A Scally, Y Chen, Y Xue, M Haber, R Ekong, T Oljira, E Mekonnen, D Luiselli, N Bradman, E Bekele, P Zalloua, R Durbin, T Kivisild, C Tyler-Smith: Tracing the route of modern humans out of Africa by using 225 human genome sequences from Ethiopians and Egyptians. The American Journal of Human Genetics (2015) [Website] [PDF]

S Schiffels, R Durbin: Inferring human population size and separation history from multiple genome sequences. Nature Genetics (2014) [Website]

A Nourmohammad, S Schiffels, M Lässig: Evolution of molecular phenotypes under stabilizing selection. Journal of Statistical Mechanics: Theory and Experiment (2013) [Website]

S Schiffels, GJ Szöllősi, V Mustonen, M Lässig: Emergent neutrality in adaptive asexual evolution. Genetics (2011) [Website] [PDF]

CJR Illingworth, L Parts, S Schiffels, G Liti, V Mustonen: Quantifying selection acting on a complex trait using allele frequency time series data. Molecular biology and evolution (2011) [Website] [PDF]

(PhD Thesis) S SchiffelsAdaptive Evolution in Linked Genomes (PhD Dissertation). Universität zu Köln (2011) [Website] [PDF]